MetaAmp Version 3.0

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MetaAmp analysis results:

Analysis name: mock

metaamp command: metaamp.dada2.paired.pl -map mapping.txt -an mock -seqtype paired -oligos oligos.txt -pdiffs 0 -email xdong@ucalgary.ca -maxN 0 -maxeeF 2 -maxeeR 4 -trunclenF 0 -trunclenR 0 -truncqF 2 -truncqR 2 -minoverlen 12 -maxdiffs 0

Submitted by xdong@ucalgary.ca

Thu Mar 12 15:02:46 MDT 2020

Download a packaged file containing all results in this page

Input raw reads statistical summary


Reads statistical summary after get rid of primers


Reads statistical summary after quality trimming and filtering


Without subsampling or rarefying

With subsampling or rarefying   

» asv and α-diversity measurements

» β-diversity measurements: asv association   

» β-diversity measurements: PCoA analysis   

» β-diversity measurements: Tree analysis   

» β-diversity measurements: NMDs analysis   

Without subsampling or rarefying

With subsampling or rarefying

» Parsimony testing   

» Unifrac.weighted   

» Unifrac.unweighted   

» AMOVA(Analysis of Molecular Variance)   

» HOMOVA (Homogenity of Molecular Variance)